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    TRT2 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853672, updated on 11-Sep-2024

    Summary

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    Official Symbol
    TRT2
    Primary source
    SGD:S000006748
    Locus tag
    YNCK0002C
    See related
    AllianceGenome:SGD:S000006748
    Gene type
    tRNA
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See TRT2 in Genome Data Viewer
    Location:
    chromosome: XI
    Sequence:
    Chromosome: XI; NC_001143.9 (46735..46806, complement)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene E1 ubiquitin-activating protein UBA1 Neighboring gene ATP-binding cassette a-factor transporter STE6 Neighboring gene Cbt1p Neighboring gene Emc3p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001143.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A La protein requirement for efficient pre-tRNA folding. Chakshusmathi G, et al. EMBO J, 2003 Dec 15. PMID 14657028, Free PMC Article
    2. Whole-Genome Transformation Promotes tRNA Anticodon Suppressor Mutations under Stress. Deparis Q, et al. mBio, 2021 Mar 23. PMID 33758086, Free PMC Article
    3. Polygenic analysis of very high acetic acid tolerance in the yeast Saccharomyces cerevisiae reveals a complex genetic background and several new causative alleles. Stojiljkovic M, et al. Biotechnol Biofuels, 2020. PMID 32695222, Free PMC Article
    4. Transcription independent insulation at TFIIIC-dependent insulators. Valenzuela L, et al. Genetics, 2009 Sep. PMID 19596900, Free PMC Article
    5. Decoding the principles underlying the frequency of association with nucleoli for RNA polymerase III-transcribed genes in budding yeast. Belagal P, et al. Mol Biol Cell, 2016 Oct 15. PMID 27559135, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    • Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis; correct folding and efficient aminoacylation require Lhp1p

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables triplet codon-amino acid adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables triplet codon-amino acid adaptor activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translational elongation IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IC
    Inferred by Curator
    more info
    		 PubMed 

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