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    CB5-C cytochrome B5 isoform C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819277, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CB5-C
    Official Full Name
    cytochrome B5 isoform C
    Primary source
    TAIR:AT2G46650
    Locus tag
    AT2G46650
    See related
    Araport:AT2G46650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS CYTOCHROME B5 ISOFORM C; ATCB5-C; B5 #1; CYTB5-C; cytochrome B5 isoform C; T3A4.3; T3A4_3
    Summary
    member of Cytochromes b5
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    Genomic context

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    See CB5-C in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (19151481..19152739)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix protein Neighboring gene NAD-dependent protein deacetylase HST1-like protein Neighboring gene cytochrome P450, family 78, subfamily A, polypeptide 6 Neighboring gene miscRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. Bernard A, et al. Plant Cell, 2012 Jul. PMID 22773744, Free PMC Article
    2. Arabidopsis sucrose transporter SUT4 interacts with cytochrome b5-2 to regulate seed germination in response to sucrose and glucose. Li Y, et al. Mol Plant, 2012 Sep. PMID 22311778
    3. Intracellular sorting of the tail-anchored protein cytochrome b5 in plants: a comparative study using different isoforms from rabbit and Arabidopsis. Maggio C, et al. J Exp Bot, 2007. PMID 17322552
    4. Association of cytochrome b5 with ETR1 ethylene receptor signaling through RTE1 in Arabidopsis. Chang J, et al. Plant J, 2014 Feb. PMID 24635651, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_130230.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables heme binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome B5 isoform C
    NP_182188.1
    • cytochrome B5 isoform C (CB5-C); CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform D (TAIR:AT5G48810.1); Has 3777 Blast hits to 3746 proteins in 458 species: Archae - 2; Bacteria - 26; Metazoa - 909; Fungi - 1474; Plants - 787; Viruses - 3; Other Eukaryotes - 576 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19151481..19152739
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130230.3 → NP_182188.1  cytochrome B5 isoform C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182188.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q682C5, Q9ZNV4
      UniProtKB/TrEMBL
      A0A178VYU9, A0A5S9X7K3, A0A7G2EHH3
      Conserved Domains (1) summary
      pfam00173
      Location:6 → 78
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZNV4.1

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