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    COX13 cytochrome c oxidase subunit VIa [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852684, updated on 17-May-2024

    Summary

    Gene symbol
    COX13
    Gene description
    cytochrome c oxidase subunit VIa
    Primary source
    FungiDB:YGL191W
    Locus tag
    YGL191W
    See related
    SGD:S000003159; AllianceGenome:SGD:S000003159
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables enzyme regulator activity. Contributes to cytochrome-c oxidase activity. Involved in aerobic respiration and mitochondrial respirasome assembly. Located in mitochondrion. Part of mitochondrial respiratory chain complex IV. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease recessive intermediate D and cytochrome-c oxidase deficiency disease. Orthologous to human COX6A1 (cytochrome c oxidase subunit 6A1) and COX6A2 (cytochrome c oxidase subunit 6A2). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See COX13 in Genome Data Viewer
    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_001139.9 (144808..145197)

    Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene mRNA (N6-adenosine)-methyltransferase Neighboring gene protein phosphatase 2A regulatory subunit CDC55 Neighboring gene ribosomal 40S subunit protein S26A

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables enzyme regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables enzyme regulator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in aerobic respiration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mitochondrial electron transport, cytochrome c to oxygen IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial respirasome assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in oxidative phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mitochondrial respiratory chain complex IV IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mitochondrial respiratory chain complex IV IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of mitochondrial respiratory chain complex IV IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cytochrome c oxidase subunit VIa
    NP_011324.1
    • Subunit VIa of cytochrome c oxidase; present in a subclass of cytochrome c oxidase complexes that may have a role in mimimizing generation of reactive oxygen species; not essential for cytochrome c oxidase activity but may modulate activity in response to ATP; required for assembly of Rcf2p into cytochrome c oxidase - cytochrome bc1 supercomplexes

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001139.9 Reference assembly

      Range
      144808..145197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181056.1NP_011324.1  TPA: cytochrome c oxidase subunit VIa [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011324.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VTW3, P32799
      UniProtKB/TrEMBL
      A0A6A5PWA0, A6ZTZ7, B3LHP0, C7GX03, C8Z860, G2WDR5, N1P2U6
      Conserved Domains (1) summary
      pfam02046
      Location:3125
      COX6A; Cytochrome c oxidase subunit VIa