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    FLO9 flocculin FLO9 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851236, updated on 2-Nov-2024

    Summary

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    Official Symbol
    FLO9
    Official Full Name
    flocculin FLO9
    Primary source
    SGD:S000000059
    Locus tag
    YAL063C
    See related
    AllianceGenome:SGD:S000000059; FungiDB:YAL063C; VEuPathDB:YAL063C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to enable D-mannose binding activity. Involved in cell-substrate adhesion and flocculation. Predicted to be located in fungal-type cell wall. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See FLO9 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_001133.9 (24000..27968, complement)

    Chromosome I - NC_001133.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene glutamate dehydrogenase (NADP(+)) GDH3 Neighboring gene putative dehydrogenase BDH2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001133.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic characterization and modification of a bioethanol-producing yeast strain. Zhang K, et al. Appl Microbiol Biotechnol, 2018 Mar. PMID 29333587
    2. Review: the dominant flocculation genes of Saccharomyces cerevisiae constitute a new subtelomeric gene family. Teunissen AW, et al. Yeast, 1995 Sep 15. PMID 7502576
    3. Multiple sequence signals determine the distribution of glycosylphosphatidylinositol proteins between the plasma membrane and cell wall in Saccharomyces cerevisiae. Frieman MB, et al. Microbiology (Reading), 2004 Oct. PMID 15470092
    4. Construction of flocculent Kluyveromyces marxianus strains suitable for high-temperature ethanol fermentation. Nonklang S, et al. Biosci Biotechnol Biochem, 2009 May. PMID 19420680
    5. Structural basis of flocculin-mediated social behavior in yeast. Veelders M, et al. Proc Natl Acad Sci U S A, 2010 Dec 28. PMID 21149680, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables D-mannose binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-substrate adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in flocculation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in flocculation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in fungal-type cell wall ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in side of membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    flocculin FLO9
    NP_009338.1
    • Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001133.9 Reference assembly

      Range
      24000..27968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178205.1 → NP_009338.1  TPA: flocculin FLO9 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009338.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VPF6, P39712
      UniProtKB/TrEMBL
      A0A088DMZ7
      Conserved Domains (2) summary
      pfam07691
      Location:118 → 249
      PA14; PA14 domain
      pfam13928
      Location:1022 → 1063
      Flocculin_t3; Flocculin type 3 repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P39712.2

    Gene LinkOut

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