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    PAU16 seripauperin PAU16 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853656, updated on 2-Nov-2024

    Summary

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    Official Symbol
    PAU16
    Official Full Name
    seripauperin PAU16
    Primary source
    SGD:S000001707
    Locus tag
    YKL224C
    See related
    AllianceGenome:SGD:S000001707; FungiDB:YKL224C; VEuPathDB:YKL224C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Predicted to be a structural constituent of cell wall. Predicted to be involved in fungal-type cell wall organization. Located in fungal-type vacuole. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See PAU16 in Genome Data Viewer
    Location:
    chromosome: XI
    Exon count:
    1
    Sequence:
    Chromosome: XI; NC_001143.9 (1810..2181, complement)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Mch2p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001143.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing of a 13.2 kb segment next to the left telomere of yeast chromosome XI revealed five open reading frames and recent recombination events with the right arms of chromosomes III and V. Alexandraki D, et al. Yeast, 1994 Apr. PMID 8091865
    2. Functional analyses of PAU genes in Saccharomyces cerevisiae. Luo Z, et al. Microbiology (Reading), 2009 Dec. PMID 19762443
    3. Complete DNA sequence of yeast chromosome XI. Dujon B, et al. Nature, 1994 Jun 2. PMID 8196765
    4. One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Yofe I, et al. Nat Methods, 2016 Apr. PMID 26928762, Free PMC Article
    5. A global genetic interaction network maps a wiring diagram of cellular function. Costanzo M, et al. Science, 2016 Sep 23. PMID 27708008, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables structural constituent of cell wall IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in fungal-type cell wall organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in fungal-type cell wall IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in fungal-type vacuole HDA PubMed 

    General protein information

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    Preferred Names
    seripauperin PAU16
    NP_012698.1
    • hypothetical protein; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001143.9 Reference assembly

      Range
      1810..2181 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179789.1 → NP_012698.1  TPA: seripauperin PAU16 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012698.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VWY0, P35994
      UniProtKB/TrEMBL
      G2WIH0
      Conserved Domains (1) summary
      pfam00660
      Location:26 → 118
      SRP1_TIP1; Seripauperin and TIP1 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P35994.1

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