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    ALT1 alanine transaminase ALT1 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 850778, updated on 28-Oct-2024

    Summary

    Official Symbol
    ALT1
    Official Full Name
    alanine transaminase ALT1
    Primary source
    SGD:S000004079
    Locus tag
    YLR089C
    See related
    AllianceGenome:SGD:S000004079; FungiDB:YLR089C; VEuPathDB:YLR089C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables L-alanine:2-oxoglutarate aminotransferase activity and pyridoxal phosphate binding activity. Involved in alanine biosynthetic process and alanine catabolic process. Is active in mitochondrion. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with spastic paraplegia and microcephaly. Orthologous to several human genes including GPT (glutamic--pyruvic transaminase). [provided by Alliance of Genome Resources, Oct 2024]
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    Genomic context

    See ALT1 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (318237..320015, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene Csf1p Neighboring gene GPI-anchor transamidase subunit GAA1 Neighboring gene Xdj1p Neighboring gene Gep5p

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables L-alanine:2-oxoglutarate aminotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables L-alanine:2-oxoglutarate aminotransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables L-alanine:2-oxoglutarate aminotransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables pyridoxal phosphate binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables transaminase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in L-alanine catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in alanine biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in alanine catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    alanine transaminase ALT1
    NP_013190.1
    • Alanine transaminase (glutamic pyruvic transaminase); involved in alanine biosynthesis and catabolism; TOR1-independent role in determining chronological lifespan; expression is induced in the presence of alanine; repression is mediated by Nrg1p; ALT1 has a paralog, ALT2, that arose from the whole genome duplication; Alt2p is catalytically inactive

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      318237..320015 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181976.1NP_013190.1  TPA: alanine transaminase ALT1 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013190.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VY89, P52893
      UniProtKB/TrEMBL
      A7A0Z3, B3LT57, B5VN23, C7GQR2, C8ZD59, G2WIT1, N1NZK1
      Conserved Domains (1) summary
      PTZ00377
      Location:111590
      PTZ00377; alanine aminotransferase; Provisional