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    PF3D7_1104000 phenylalanine--tRNA ligase beta subunit [ Plasmodium falciparum 3D7 ]

    Gene ID: 810604, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1104000
    Gene description
    phenylalanine--tRNA ligase beta subunit
    Locus tag
    PF3D7_1104000
    See related
    PlasmoDB:PF3D7_1104000; VEuPathDB:PF3D7_1104000
    Gene type
    protein coding
    RNA name
    phenylalanine--tRNA ligase beta subunit
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1104000 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Sequence:
    Chromosome: 11; NC_037282.1 (175608..177778, complement)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex subunit 1, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene syntaxin, Qa-SNARE family Neighboring gene chromatin remodeling protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome mapping of Plasmodium: identification of the P. yoelii remodellome. Siau A, et al. Sci Rep, 2016 Aug 9. PMID 27503796, Free PMC Article
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in intracellular anatomical structure ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    phenylalanine--tRNA ligase beta subunit
    XP_001347727.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      175608..177778 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347691.1 → XP_001347727.1  phenylalanine--tRNA ligase beta subunit [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347727.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V4G7, A0A024W590, A0A024X724, A0A0L7KAM4, A0A0L7M6M4, Q8IIW2, W4IF35, W4IZG8, W7FB36, W7FWZ2, W7JTS1
      Conserved Domains (1) summary
      PLN02265
      Location:1 → 618
      PLN02265; probable phenylalanyl-tRNA synthetase beta chain
    Nucleotide Protein
    Heading Accession and Version

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