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    PF_RS03025 DEAD/DEAH box helicase [ Pyrococcus furiosus DSM 3638 ]

    Gene ID: 1468435, updated on 22-Oct-2024

    Summary

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    Gene symbol
    PF_RS03025
    Gene description
    DEAD/DEAH box helicase
    Locus tag
    PF_RS03025
    Gene type
    protein coding
    Organism
    Pyrococcus furiosus DSM 3638 (strain: DSM 3638, type-material: type strain of Pyrococcus furiosus)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
    Old locus tag
    PF0592
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    Genomic context

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    Sequence:
    NC_003413.1 (611563..614166, complement)

    NC_003413.1Genomic Context describing neighboring genes Neighboring gene mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Neighboring gene mannosyl-3-phosphoglycerate phosphatase Neighboring gene mannosyl-3-phosphoglycerate synthase Neighboring gene MBL fold metallo-hydrolase Neighboring gene ornithine carbamoyltransferase Neighboring gene diphthine synthase Neighboring gene MBL fold metallo-hydrolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003413.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology. Robb FT, et al. Methods Enzymol, 2001. PMID 11210495
    2. Evidence of recent lateral gene transfer among hyperthermophilic archaea. Diruggiero J, et al. Mol Microbiol, 2000 Nov. PMID 11115105
    3. Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences. Maeder DL, et al. Genetics, 1999 Aug. PMID 10430560, Free PMC Article
    4. DEAD-box helicases: posttranslational regulation and function. Gustafson EA, et al. Biochem Biophys Res Commun, 2010 Apr 23. PMID 20206133, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DEAD/DEAH box helicase
    WP_011011711.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003413.1 Reference assembly

      Range
      611563..614166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011011711.1 DEAD/DEAH box helicase [Pyrococcus furiosus]

      See identical proteins and their annotated locations for WP_011011711.1

      UniProtKB/TrEMBL
      Q8U379
      Conserved Domains (4) summary
      COG1205
      Location:1 → 867
      YprA; ATP-dependent helicase YprA, contains C-terminal metal-binding DUF1998 domain [Replication, recombination and repair]
      pfam00270
      Location:48 → 222
      DEAD; DEAD/DEAH box helicase
      pfam00271
      Location:263 → 373
      Helicase_C; Helicase conserved C-terminal domain
      pfam09369
      Location:762 → 841
      DUF1998; Domain of unknown function (DUF1998)
    Nucleotide Protein
    Heading Accession and Version

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