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    cmr1 type III-B CRISPR module RAMP protein Cmr1 [ Pyrococcus furiosus DSM 3638 ]

    Gene ID: 1468999, updated on 22-Oct-2024

    Summary

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    Gene symbol
    cmr1
    Gene description
    type III-B CRISPR module RAMP protein Cmr1
    Locus tag
    PF_RS05675
    Gene type
    protein coding
    Organism
    Pyrococcus furiosus DSM 3638 (strain: DSM 3638, type-material: type strain of Pyrococcus furiosus)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
    Old locus tag
    PF1130
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    Genomic context

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    Sequence:
    NC_003413.1 (1080337..1081353, complement)

    NC_003413.1Genomic Context describing neighboring genes Neighboring gene type III-B CRISPR module-associated protein Cmr5 Neighboring gene type III-B CRISPR module RAMP protein Cmr4 Neighboring gene CRISPR-associated CARF protein Csx1 Neighboring gene type III-B CRISPR module-associated protein Cmr3 Neighboring gene type III-B CRISPR-associated protein Cas10/Cmr2 Neighboring gene CRISPR-associated endoribonuclease Cas6 Neighboring gene carbamoyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003413.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of an RNA silencing complex of the CRISPR-Cas immune system. Spilman M, et al. Mol Cell, 2013 Oct 10. PMID 24119404, Free PMC Article
    2. RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex. Hale CR, et al. Cell, 2009 Nov 25. PMID 19945378, Free PMC Article
    3. Structural model of a CRISPR RNA-silencing complex reveals the RNA-target cleavage activity in Cmr4. Benda C, et al. Mol Cell, 2014 Oct 2. PMID 25280103
    4. A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis. Makarova KS, et al. Nucleic Acids Res, 2002 Jan 15. PMID 11788711, Free PMC Article
    5. Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences. Maeder DL, et al. Genetics, 1999 Aug. PMID 10430560, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    type III-B CRISPR module RAMP protein Cmr1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003413.1 Reference assembly

      Range
      1080337..1081353 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011012270.1 type III-B CRISPR module RAMP protein Cmr1 [Pyrococcus furiosus]

      See identical proteins and their annotated locations for WP_011012270.1

      UniProtKB/Swiss-Prot
      Q8U1S5
      Conserved Domains (1) summary
      TIGR01894
      Location:8 → 164
      cas_TM1795_cmr1; CRISPR type III-B/RAMP module RAMP protein Cmr1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8U1S5.1

    Gene LinkOut

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