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    cas2 CRISPR-associated endonuclease Cas2 [ Pyrococcus furiosus DSM 3638 ]

    Gene ID: 1468986, updated on 24-Oct-2024

    Summary

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    Gene symbol
    cas2
    Gene description
    CRISPR-associated endonuclease Cas2
    Locus tag
    PF_RS05610
    Gene type
    protein coding
    Organism
    Pyrococcus furiosus DSM 3638 (strain: DSM 3638, type-material: type strain of Pyrococcus furiosus)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
    Old locus tag
    PF1117
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    Genomic context

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    Sequence:
    NC_003413.1 (1066025..1066282)

    NC_003413.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene RNA-binding protein Neighboring gene orotidine-5'-phosphate decarboxylase Neighboring gene adenylyltransferase/cytidyltransferase family protein Neighboring gene type I-B CRISPR-associated endonuclease Cas1b Neighboring gene CRISPR-associated helicase/endonuclease Cas3 Neighboring gene CRISPR-associated protein Cas4 Neighboring gene type I-B CRISPR-associated protein Cas5b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003413.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Double-stranded endonuclease activity in Bacillus halodurans clustered regularly interspaced short palindromic repeats (CRISPR)-associated Cas2 protein. Nam KH, et al. J Biol Chem, 2012 Oct 19. PMID 22942283, Free PMC Article
    2. A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats. Beloglazova N, et al. J Biol Chem, 2008 Jul 18. PMID 18482976, Free PMC Article
    3. Identification of genes that are associated with DNA repeats in prokaryotes. Jansen R, et al. Mol Microbiol, 2002 Mar. PMID 11952905
    4. Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology. Robb FT, et al. Methods Enzymol, 2001. PMID 11210495
    5. Evidence of recent lateral gene transfer among hyperthermophilic archaea. Diruggiero J, et al. Mol Microbiol, 2000 Nov. PMID 11115105

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    CRISPR-associated endonuclease Cas2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003413.1 Reference assembly

      Range
      1066025..1066282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_014835332.1 MULTISPECIES: CRISPR-associated endonuclease Cas2 [Pyrococcus]

      See identical proteins and their annotated locations for WP_014835332.1

      UniProtKB/Swiss-Prot
      Q8U1T8
      UniProtKB/TrEMBL
      A0A5C0XPX3, I6V1H0
      Conserved Domains (1) summary
      COG1343
      Location:1 → 85
      Cas2; CRISPR/Cas system-associated endoribonuclease Cas2 [Defense mechanisms]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8U1T8.1

    Gene LinkOut

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