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    mmd1 deoxyhypusine hydroxylase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541465, updated on 18-Sep-2024

    Summary

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    Official Symbol
    mmd1
    Official Full Name
    deoxyhypusine hydroxylase
    Primary source
    PomBase:SPAC30C2.02
    Locus tag
    SPOM_SPAC30C2.02
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See mmd1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (4635475..4636898)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene dynein heavy chain, minus-end directed microtubule motor Dhc1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene methionyl and glutamyl-tRNA synthetase cofactor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mmd1p, a novel, conserved protein essential for normal mitochondrial morphology and distribution in the fission yeast Schizosaccharomyces pombe. Weir BA, et al. Mol Biol Cell, 2004 Apr. PMID 14767070, Free PMC Article
    2. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Dixon SJ, et al. Proc Natl Acad Sci U S A, 2008 Oct 28. PMID 18931302, Free PMC Article
    3. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
    4. Chromatin remodeller Fun30(Fft3) induces nucleosome disassembly to facilitate RNA polymerase II elongation. Lee J, et al. Nat Commun, 2017 Feb 20. PMID 28218250, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables deoxyhypusine monooxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of cytoplasmic translation IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    deoxyhypusine hydroxylase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4635475..4636898
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020083.3 → NP_594654.1  deoxyhypusine hydroxylase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594654.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9P6K9
      Conserved Domains (3) summary
      smart00567
      Location:256 → 285
      EZ_HEAT; E-Z type HEAT repeats
      COG1413
      Location:6 → 311
      HEAT; HEAT repeat [General function prediction only]
      sd00044
      Location:210 → 238
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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