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    STMP1 short transmembrane mitochondrial protein 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 610249, updated on 5-Mar-2024

    Summary

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    Gene symbol
    STMP1
    Gene description
    short transmembrane mitochondrial protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    C16H7orf73
    Orthologs
    human mouse all
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    Genomic context

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    See STMP1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (12565711..12581072, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (13598692..13613967, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (12246881..12262160, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (13008193..13023384, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (12108083..12123432, complement)

    Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 180 member A Neighboring gene solute carrier family 13 member 4 Neighboring gene uncharacterized LOC111090244 Neighboring gene thymosin beta-4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrial respirasome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short transmembrane mitochondrial protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051820.1 Reference ROS_Cfam_1.0

      Range
      12565711..12581072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038688942.1 → XP_038544870.1  short transmembrane mitochondrial protein 1 isoform X1

      Conserved Domains (1) summary
      pfam15054
      Location:181 → 219
      DUF4535; Domain of unknown function (DUF4535)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049276.1 Alternate UMICH_Zoey_3.1

      Range
      13008193..13023384 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038498076.1 → XP_038354004.1  short transmembrane mitochondrial protein 1 isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

      Range
      12108083..12123432 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038623204.1 → XP_038479132.1  short transmembrane mitochondrial protein 1 isoform X3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

      Range
      12246881..12262160 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038560569.1 → XP_038416497.1  short transmembrane mitochondrial protein 1 isoform X4

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      13598692..13613967 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038452632.1 → XP_038308560.1  short transmembrane mitochondrial protein 1 isoform X5

      Conserved Domains (1) summary
      pfam15054
      Location:155 → 193
      DUF4535; Domain of unknown function (DUF4535)
    Nucleotide Protein
    Heading Accession and Version

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