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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_021200.2 RefSeqGene
- Range
-
63295..123938
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001178032.3 → NP_001171503.1 zinc finger C4H2 domain-containing protein isoform 2
See identical proteins and their annotated locations for NP_001171503.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a distinct N-terminus and is shorter than isoform 1. Both variants 2 and 4 encode the same isoform.
- Source sequence(s)
-
AK001547, AK022807, BP376634
- Consensus CDS
-
CCDS55431.1
- UniProtKB/TrEMBL
-
A0A8V8TR70
- Related
- ENSP00000338650.2, ENST00000337990.2
- Conserved Domains (1) summary
-
- pfam10146
Location:1 → 198
- zf-C4H2; Zinc finger-containing protein
-
NM_001178033.3 → NP_001171504.1 zinc finger C4H2 domain-containing protein isoform 3
See identical proteins and their annotated locations for NP_001171504.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the 3' coding region that results in a frameshift, compared to variant 1. The resulting isoform (3) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AK001547, AK293570
- Consensus CDS
-
CCDS55432.1
- UniProtKB/Swiss-Prot
-
Q9NQZ6
- Related
- ENSP00000399126.2, ENST00000447788.6
- Conserved Domains (1) summary
-
- pfam10146
Location:13 → 130
- zf-C4H2; Zinc finger-containing protein
-
NM_001243804.2 → NP_001230733.1 zinc finger C4H2 domain-containing protein isoform 2
See identical proteins and their annotated locations for NP_001230733.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a distinct N-terminus and is shorter than isoform 1. Both variants 2 and 4 encode the same isoform.
- Source sequence(s)
-
AK001547, BP376634, CX782941
- Consensus CDS
-
CCDS55431.1
- UniProtKB/TrEMBL
-
A0A8V8TR70
- Conserved Domains (1) summary
-
- pfam10146
Location:1 → 198
- zf-C4H2; Zinc finger-containing protein
-
NM_018684.4 → NP_061154.1 zinc finger C4H2 domain-containing protein isoform 1
See identical proteins and their annotated locations for NP_061154.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AK001547, BC004411
- Consensus CDS
-
CCDS14380.1
- UniProtKB/Swiss-Prot
- B2RDC2, B3KVZ5, B4DED0, E7EM74, G3V1L3, Q53H73, Q5JTF9, Q9H9C3, Q9H9H7, Q9NQZ6, Q9ULQ4
- Related
- ENSP00000363972.3, ENST00000374839.8
- Conserved Domains (1) summary
-
- pfam10146
Location:13 → 221
- zf-C4H2; Zinc finger-containing protein
RNA
-
NR_045044.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate splice site in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the supported start codon, as used by variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK001547, AK022807, BI770655, DA037517
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
64915807..65034741 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
63341227..63460162 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)