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    VID27 Vid27p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855509, updated on 2-Nov-2024

    Summary

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    Official Symbol
    VID27
    Official Full Name
    Vid27p
    Primary source
    SGD:S000005156
    Locus tag
    YNL212W
    See related
    AllianceGenome:SGD:S000005156; FungiDB:YNL212W; VEuPathDB:YNL212W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See VID27 in Genome Data Viewer
    Location:
    chromosome: XIV
    Exon count:
    1
    Sequence:
    Chromosome: XIV; NC_001146.8 (247461..249809)

    Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Pex17p Neighboring gene Rrg9p Neighboring gene Mrx7p Neighboring gene Mer1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001146.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Inactivation of the VID27 gene prevents suppression of the doa4 degradation defect in doa4Δ did3Δ double mutant. Wolters N, et al. Biochem Biophys Res Commun, 2017 Jan 22. PMID 27939891
    2. The Shape of Vesicle-Containing Organelles Is Critical for Their Functions in Vesicle Endocytosis. Winters CM, et al. DNA Cell Biol, 2017 Nov. PMID 29040005
    3. Disruption and basic phenotypic analysis of 18 novel genes from the yeast Saccharomyces cerevisiae. Wysocki R, et al. Yeast, 1999 Jan 30. PMID 10029995
    4. Catabolite degradation of fructose-1,6-bisphosphatase in the yeast Saccharomyces cerevisiae: a genome-wide screen identifies eight novel GID genes and indicates the existence of two degradation pathways. Regelmann J, et al. Mol Biol Cell, 2003 Apr. PMID 12686616, Free PMC Article
    5. Using HHsearch to tackle proteins of unknown function: A pilot study with PH domains. Fidler DR, et al. Traffic, 2016 Nov. PMID 27601190, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. inactivation of Vid27 (vacuolar import and degradation) prevents suppression of the doa4 phenotype by did3 mutation
      Title: Inactivation of the VID27 gene prevents suppression of the doa4 degradation defect in doa4Δ did3Δ double mutant.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Vid27p
    NP_014187.1
    • Cytoplasmic hypothetical protein; possibly involved in vacuolar protein degradation; not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase); null mutants exhibit normal growth; contains two PH-like domains

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001146.8 Reference assembly

      Range
      247461..249809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183050.1 → NP_014187.1  TPA: Vid27p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_014187.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W0X8, P40157
      UniProtKB/TrEMBL
      A6ZRM8, B3LP56, C7GPE5, C8ZG20, N1P443
      Conserved Domains (1) summary
      COG5167
      Location:1 → 782
      VID27; Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40157.1

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