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    SEPTIN7P2 septin 7 pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 641977, updated on 17-Sep-2024

    Summary

    Official Symbol
    SEPTIN7P2provided by HGNC
    Official Full Name
    septin 7 pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:32339
    See related
    Ensembl:ENSG00000291207 MIM:611563; AllianceGenome:HGNC:32339
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SEPT13; SEPT7B; SEPT7P2
    Summary
    Septins, such as SEPT13, are conserved GTP-binding proteins that function as dynamic, regulatable scaffolds for the recruitment of other proteins. They are involved in membrane dynamics, vesicle trafficking, apoptosis, and cytoskeleton remodeling, as well as infection, neurodegeneration, and neoplasia (Hall et al., 2005 [PubMed 15915442]).[supplied by OMIM, Jul 2008]
    Expression
    Ubiquitous expression in testis (RPKM 5.5), endometrium (RPKM 5.0) and 25 other tissues See more
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    Genomic context

    See SEPTIN7P2 in Genome Data Viewer
    Location:
    7p12.3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (45723787..45769018, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (45885521..45930765, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (45763386..45808617, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:45447719-45448219 Neighboring gene ELK1 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:45612981-45613541 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18165 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:45621441-45622436 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:45639347-45639848 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:45648436-45649411 Neighboring gene adenylate cyclase 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:45685301-45686214 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:45725783-45726284 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:45808449-45809226 Neighboring gene uncharacterized LOC124901625 Neighboring gene general transcription factor IIi pseudogene 13 Neighboring gene RNA, U6 small nuclear 241, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024271.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC091439, AC096582, AL832059, BC092503, DA100871
      Related
      ENST00000428414.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      45723787..45769018 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      45885521..45930765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)