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    Y92H12A.5 tRNA (32-2'-O)-methyltransferase regulator THADA [ Caenorhabditis elegans ]

    Gene ID: 171716, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Y92H12A.5
    Official Full Name
    tRNA (32-2'-O)-methyltransferase regulator THADA
    Primary source
    WormBase:WBGene00022361
    Locus tag
    CELE_Y92H12A.5
    See related
    AllianceGenome:WB:WBGene00022361
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in tRNA methylation. Orthologous to human THADA (THADA armadillo repeat containing). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Y92H12A.5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    13
    Sequence:
    Chromosome: I; NC_003279.8 (1490431..1514417, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene AMP-dependent synthetase/ligase domain-containing protein Neighboring gene ncRNA Neighboring gene Dystrobrevin-1 Neighboring gene SOSS complex subunit A homolog Neighboring gene E3 ubiquitin-protein ligase;HECT-type E3 ubiquitin transferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in tRNA methylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    tRNA (32-2'-O)-methyltransferase regulator THADA
    NP_001293426.1
    • Confirmed by transcript evidence
    NP_490861.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      1490431..1514417 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001306497.3 → NP_001293426.1  tRNA (32-2'-O)-methyltransferase regulator THADA [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293426.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      W6RTG0
      Conserved Domains (1) summary
      pfam10350
      Location:636 → 873
      DUF2428; Putative death-receptor fusion protein (DUF2428)

    2. NM_058460.5 → NP_490861.3  tRNA (32-2'-O)-methyltransferase regulator THADA [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_490861.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2AAB7
      Conserved Domains (1) summary
      pfam10350
      Location:636 → 873
      DUF2428; Putative death-receptor fusion protein (DUF2428)
    Nucleotide Protein
    Heading Accession and Version

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