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    f11r.L F11 receptor L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 398627, updated on 4-Nov-2024

    Summary

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    Official Symbol
    f11r.L
    Official Full Name
    F11 receptor L homeolog
    Primary source
    Xenbase:XB-GENE-6255781
    Locus tag
    XELAEV_18040966mg
    See related
    EnsemblRapid:ENSXLAG00005002043 AllianceGenome:Xenbase:XB-GENE-6255781
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    jam; kat; f11r; jam1; jama; jcam; cd321; pam-1
    Summary
    Predicted to act upstream of or within several processes, including establishment of endothelial intestinal barrier; intestinal absorption; and regulation of membrane permeability. Predicted to be located in bicellular tight junction and plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See f11r.L in Genome Data Viewer
    Location:
    chromosome: 8L
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (135181761..135193402, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (119874021..119885673, complement)

    Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 9 L homeolog Neighboring gene potassium inwardly rectifying channel subfamily J member 10 L homeolog Neighboring gene thiosulfate:glutathione sulfurtransferase-like Neighboring gene putative thiosulfate sulfurtransferase, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC130680

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within establishment of endothelial intestinal barrier IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within intestinal absorption IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of membrane permeability IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    F11 receptor L homeolog; junctional adhesion molecule A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      135181761..135193402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018231594.2 → XP_018087083.1  junctional adhesion molecule A

      UniProtKB/TrEMBL
      A0A974CAK8, Q2VPP6, Q640C0
      Related
      ENSXLAP00005006155.1, ENSXLAT00005006261.1
    Nucleotide Protein Strain
    Heading Accession and Version

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