NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016264.2 RefSeqGene
- Range
-
31188..65307
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001170553.2 → NP_001164024.1 V-set and immunoglobulin domain-containing protein 1 isoform 1 precursor
See identical proteins and their annotated locations for NP_001164024.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AK301311, AL031177, BX648658
- Consensus CDS
-
CCDS55474.1
- UniProtKB/TrEMBL
-
A8K8V7
- Related
- ENSP00000402219.3, ENST00000415430.7
- Conserved Domains (3) summary
-
- cd00096
Location:193 → 260
- Ig; Immunoglobulin domain
- smart00410
Location:190 → 263
- IG_like; Immunoglobulin like
- cl11960
Location:28 → 163
- Ig; Immunoglobulin domain
-
NM_182607.5 → NP_872413.1 V-set and immunoglobulin domain-containing protein 1 isoform 2 precursor
See identical proteins and their annotated locations for NP_872413.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame coding exon, as compared to variant 1. The resulting isoform (2) lacks an internal segment, as compared to isoform 1.
- Source sequence(s)
-
AL031177, BX648658
- Consensus CDS
-
CCDS14535.1
- UniProtKB/Swiss-Prot
- C9J4P2, Q6MZS4, Q86XK7
- UniProtKB/TrEMBL
-
A8K8V7
- Related
- ENSP00000217957.3, ENST00000217957.10
- Conserved Domains (3) summary
-
- pfam13927
Location:142 → 215
- Ig_3; Immunoglobulin domain
- cl11960
Location:31 → 127
- Ig; Immunoglobulin domain
- cl25865
Location:275 → 342
- Trypan_PARP; Procyclic acidic repetitive protein (PARP)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
108018879..108079184
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011530936.3 → XP_011529238.1 V-set and immunoglobulin domain-containing protein 1 isoform X2
- UniProtKB/TrEMBL
-
A8K8V7
- Conserved Domains (3) summary
-
- cd00096
Location:212 → 279
- Ig; Immunoglobulin domain
- smart00410
Location:209 → 282
- IG_like; Immunoglobulin like
- cl11960
Location:90 → 182
- Ig; Immunoglobulin domain
-
XM_047442073.1 → XP_047298029.1 V-set and immunoglobulin domain-containing protein 1 isoform X4
-
XM_005262127.5 → XP_005262184.1 V-set and immunoglobulin domain-containing protein 1 isoform X1
- UniProtKB/TrEMBL
-
A8K8V7
- Conserved Domains (3) summary
-
- cd00096
Location:219 → 286
- Ig; Immunoglobulin domain
- smart00410
Location:216 → 289
- IG_like; Immunoglobulin like
- cl11960
Location:97 → 189
- Ig; Immunoglobulin domain
-
XM_047442072.1 → XP_047298028.1 V-set and immunoglobulin domain-containing protein 1 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
106456465..106516780
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054326974.1 → XP_054182949.1 V-set and immunoglobulin domain-containing protein 1 isoform X4
-
XM_054326972.1 → XP_054182947.1 V-set and immunoglobulin domain-containing protein 1 isoform X1
-
XM_054326973.1 → XP_054182948.1 V-set and immunoglobulin domain-containing protein 1 isoform X3