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    RPR1 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 9164884, updated on 2-Nov-2024

    Summary

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    Official Symbol
    RPR1
    Primary source
    SGD:S000006490
    Locus tag
    YNCE0007C
    See related
    AllianceGenome:SGD:S000006490
    Gene type
    ncRNA
    RNA name
    RNase_P_RNA
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Contributes to ribonuclease P activity. Involved in intronic box C/D snoRNA processing and tRNA processing. Part of nucleolar ribonuclease P complex. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See RPR1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_001137.3 (117667..118035, complement)

    Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene orotidine-5'-phosphate decarboxylase Neighboring gene protein transporter TIM9 Neighboring gene putative indolepyruvate decarboxylase family protein Neighboring gene SUMO ligase MMS21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001137.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of RNase P RNA in Saccharomyces cerevisiae is controlled by an unusual RNA polymerase III promoter. Lee JY, et al. Proc Natl Acad Sci U S A, 1991 Aug 15. PMID 1871114, Free PMC Article
    2. Replacement of the Saccharomyces cerevisiae RPR1 gene with heterologous RNase P RNA genes. Pagán-Ramos E, et al. Nucleic Acids Res, 1994 Jan 25. PMID 8121805, Free PMC Article
    3. Comparative structural analysis of nuclear RNase P RNAs from yeast. Tranguch AJ, et al. J Biol Chem, 1993 Jul 5. PMID 8314772
    4. Mutational analysis of Saccharomyces cerevisiae nuclear RNase P: randomization of universally conserved positions in the RNA subunit. Pagán-Ramos E, et al. RNA, 1996 May. PMID 8665411, Free PMC Article
    5. A conserved RNA motif involved in divalent cation utilization by nuclear RNase P. Pagán-Ramos E, et al. RNA, 1996 Nov. PMID 8903341, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    • RNA component of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; may be responsible for recognition of substrate tRNAs

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    contributes_to ribonuclease P activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ribonuclease P activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    contributes_to ribonuclease P activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intronic box C/D snoRNA processing IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in intronic box C/D snoRNA processing IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in tRNA processing IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA processing IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nucleolar ribonuclease P complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of ribonuclease P complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001137.3 Reference assembly

      Range
      117667..118035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_132166.1 RNA Sequence

      Status: REVIEWED

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