U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RET3 coatomer subunit zeta [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856097, updated on 3-Nov-2024

    Summary

    Official Symbol
    RET3
    Official Full Name
    coatomer subunit zeta
    Primary source
    SGD:S000005931
    Locus tag
    YPL010W
    See related
    AllianceGenome:SGD:S000005931; FungiDB:YPL010W; VEuPathDB:YPL010W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Part of COPI vesicle coat. Orthologous to several human genes including COPZ2 (COPI coat complex subunit zeta 2). [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See RET3 in Genome Data Viewer
    Location:
    chromosome: XVI
    Exon count:
    1
    Sequence:
    Chromosome: XVI; NC_001148.4 (535018..535587)

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene mRNA-binding protein RRP12 Neighboring gene Taf3p Neighboring gene Rqc2p Neighboring gene DNA helicase

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    part_of COPI vesicle coat IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of COPI vesicle coat IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of COPI vesicle coat IEA
    Inferred from Electronic Annotation
    more info
     
    part_of COPI vesicle coat IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in COPI-coated vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    coatomer subunit zeta
    NP_015315.1
    • Zeta subunit of the coatomer complex (COPI); COPI coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4 Reference assembly

      Range
      535018..535587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183824.1NP_015315.1  TPA: coatomer subunit zeta [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015315.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W402, P53600
      UniProtKB/TrEMBL
      A6ZWN6, B3LL52, B5VTF2, C7GU40, C8ZJ17, G2WPH0, N1NVI8
      Conserved Domains (1) summary
      COG5541
      Location:3189
      RET3; Vesicle coat complex COPI, zeta subunit [Posttranslational modification, protein turnover, chaperones]