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    YAR1 Yar1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 855837, updated on 2-Nov-2024

    Summary

    Official Symbol
    YAR1
    Official Full Name
    Yar1p
    Primary source
    SGD:S000006160
    Locus tag
    YPL239W
    See related
    AllianceGenome:SGD:S000006160; FungiDB:YPL239W; VEuPathDB:YPL239W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables unfolded protein binding activity. Involved in several processes, including cellular response to oxidative stress; response to osmotic stress; and ribosome biogenesis. Located in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See YAR1 in Genome Data Viewer
    Location:
    chromosome: XVI
    Exon count:
    1
    Sequence:
    Chromosome: XVI; NC_001148.4 (99484..100086)

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene GTPase-activating protein CIN2 Neighboring gene Hsp90 family chaperone HSP82 Neighboring gene translation initiation factor eIF2 subunit beta Neighboring gene putative serine/threonine protein kinase ENV7

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables unfolded protein binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables unfolded protein binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of MBF transcription complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of SBF transcription complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IGI
    Inferred from Genetic Interaction
    more info
    PubMed 

    General protein information

    Preferred Names
    Yar1p
    NP_015085.1
    • Nucleocytoplasmic shuttling assembly chaperone; co-translationally associates with nascent Rps3p in the cytoplasm and delivers it to pre-ribosomal subunits in the nucleus; required for 40S ribosomal subunit nuclear export, biogenesis and adaptation to osmotic and oxidative stress; contains ankyrin-repeats; expression repressed by heat shock

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4 Reference assembly

      Range
      99484..100086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184053.1NP_015085.1  TPA: Yar1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015085.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W3D2, P46683
      UniProtKB/TrEMBL
      A6ZW17, B3LKJ3, B5VSU4, C7GU77, C8ZIE0, G2WNU7, N1NW43
      Conserved Domains (2) summary
      sd00045
      Location:1147
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:20124
      Ank_2; Ankyrin repeats (3 copies)