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    QWRF3 QWRF motif protein (DUF566) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816612, updated on 6-Oct-2023

    Summary

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    Gene symbol
    QWRF3
    Gene description
    QWRF motif protein (DUF566)
    Primary source
    Araport:AT2G20815
    Locus tag
    AT2G20815
    See related
    TAIR:AT2G20815
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    QWRF domain containing 3
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    Genomic context

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    See QWRF3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (8959255..8962149)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene NAD(P)H dehydrogenase B4 Neighboring gene DNA-binding storekeeper protein transcriptional regulator-like protein Neighboring gene galacturonosyltransferase 10 Neighboring gene miscRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001202634.2
    NM_001335707.1
    NM_127648.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    QWRF motif protein (DUF566)
    NP_001189563.1
    • Family of unknown function (DUF566); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT2G20616.1).
    NP_565486.1
    • Family of unknown function (DUF566); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT2G20616.1); Has 226 Blast hits to 219 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 17; Fungi - 0; Plants - 190; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8959255..8962149
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335706.1 → NP_001324755.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VUT5, A0A1P8B132

    2. NM_001202634.2 → NP_001189563.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189563.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F5F3
      Conserved Domains (1) summary
      pfam04484
      Location:121 → 415
      DUF566; Family of unknown function (DUF566)

    3. NM_001335707.1 → NP_001324756.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B141, A0A654F5F3

    4. NM_127648.3 → NP_565486.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565486.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IFJ5, Q5XVE3, Q8S8I1
      UniProtKB/TrEMBL
      A0A178VUT5
      Conserved Domains (1) summary
      pfam04484
      Location:150 → 443
      DUF566; Family of unknown function (DUF566)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S8I1.1

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