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    transmembrane protein, putative (DUF677) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816378, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane protein, putative (DUF677)
    Primary source
    TAIR:AT2G18630
    Locus tag
    AT2G18630
    See related
    Araport:AT2G18630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24H14.1
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (8080354..8082901)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ubiquitin-conjugating enzyme family protein Neighboring gene Terpenoid synthases superfamily protein Neighboring gene geranylgeranyl pyrophosphate synthase 4 Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic analysis of leaf peroxisomal proteins in greening cotyledons of Arabidopsis thaliana. Fukao Y, et al. Plant Cell Physiol, 2002 Jul. PMID 12154131
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127419.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein, putative (DUF677)
    NP_179453.2
    • Protein of unknown function (DUF677); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, peroxisome, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT5G66675.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8080354..8082901
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335601.1 → NP_001325279.1  transmembrane protein, putative (DUF677) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTJ7, A0A1P8B2P1

    2. NM_127419.4 → NP_179453.2  transmembrane protein, putative (DUF677) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179453.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56XQ0, Q9ZNR3
      UniProtKB/TrEMBL
      A0A178VTJ7, A0A5S9WZ77
      Conserved Domains (1) summary
      pfam05055
      Location:47 → 375
      DUF677; Protein of unknown function (DUF677)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q56XQ0.3

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