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    ATPK7 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822380, updated on 7-Sep-2023

    Summary

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    Gene symbol
    ATPK7
    Gene description
    Protein kinase superfamily protein
    Primary source
    Araport:AT3G27580
    Locus tag
    AT3G27580
    See related
    TAIR:AT3G27580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    D6 PROTEIN KINASE LIKE 3; D6PKL3
    Summary
    a member of a subfamily of Ser/Thr PKs in plants.
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    Genomic context

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    See ATPK7 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (10217417..10220061, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Sucrase/ferredoxin-like family protein Neighboring gene reverse transcriptase family protein Neighboring gene SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis Protein Kinase D6PKL3 Is Involved in the Formation of Distinct Plasma Membrane Aperture Domains on the Pollen Surface. Lee BH, et al. Plant Cell, 2018 Sep. PMID 30150313, Free PMC Article
    2. Characterization of a gene that encodes a homologue of protein kinase in Arabidopsis thaliana. Hayashida N, et al. Gene, 1992 Nov 16. PMID 1446831
    3. Roles of AGCVIII Kinases in the Hypocotyl Phototropism of Arabidopsis Seedlings. Haga K, et al. Plant Cell Physiol, 2018 May 1. PMID 29490064
    4. D6PK AGCVIII kinases are required for auxin transport and phototropic hypocotyl bending in Arabidopsis. Willige BC, et al. Plant Cell, 2013 May. PMID 23709629, Free PMC Article
    5. Structural and functional insights into the regulation of Arabidopsis AGC VIIIa kinases. Zegzouti H, et al. J Biol Chem, 2006 Nov 17. PMID 16973627

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001035707.3
    NM_113674.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein kinase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in basipetal auxin transport TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within phototropism IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen aperture formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein phosphorylation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane region IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Protein kinase superfamily protein
    NP_001030784.1
    • ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_189395.1
    • ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 118014 Blast hits to 91974 proteins in 2859 species: Archae - 52; Bacteria - 14000; Metazoa - 46533; Fungi - 13234; Plants - 22437; Viruses - 379; Other Eukaryotes - 21379 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10217417..10220061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113674.4 → NP_189395.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189395.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q05999, Q67YR9
      UniProtKB/TrEMBL
      A0A178VEX9, A0A5S9XG81
      Conserved Domains (1) summary
      cd05574
      Location:180 → 540
      STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases

    2. NM_001035707.3 → NP_001030784.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030784.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q05999, Q67YR9
      UniProtKB/TrEMBL
      A0A178VEX9, A0A5S9XG81
      Conserved Domains (1) summary
      cd05574
      Location:180 → 540
      STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q05999.1

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