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    Phox4 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829338, updated on 18-Sep-2024

    Summary

    Official Symbol
    Phox4
    Official Full Name
    Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
    Primary source
    TAIR:AT4G32070
    Locus tag
    AT4G32070
    See related
    Araport:AT4G32070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10N7.120; F10N7_120
    Summary
    Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.
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    Genomic context

    See Phox4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (15503802..15507312, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene neurochondrin family protein Neighboring gene calcium-binding EF hand family protein Neighboring gene uncharacterized protein Neighboring gene Beta-1,3-N-Acetylglucosaminyltransferase family protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001342126.1
    NM_001342127.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
     
    located_in plant-type vacuole HDA PubMed 

    General protein information

    Preferred Names
    Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
    NP_001320111.1
    • Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein (TAIR:AT2G25290.3); Has 6060 Blast hits to 4914 proteins in 361 species: Archae - 26; Bacteria - 288; Metazoa - 2537; Fungi - 747; Plants - 1305; Viruses - 3; Other Eukaryotes - 1154 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15503802..15507312 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342126.1NP_001320111.1  Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JTI1, O49385, Q56Y06
      UniProtKB/TrEMBL
      A0A178UWG6, A0A5S9XXS9, A0A654FUQ4
      Conserved Domains (5) summary
      smart00666
      Location:317393
      PB1; PB1 domain
      TIGR00990
      Location:51147
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      sd00006
      Location:5179
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:545578
      TPR_11; TPR repeat
      pfam02259
      Location:535625
      FAT; FAT domain
    2. NM_001342127.1NP_001329553.1  Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JTI1, O49385, Q56Y06
      UniProtKB/TrEMBL
      A0A178UWG6, A0A5S9XXS9, A0A654FUQ4
      Conserved Domains (5) summary
      smart00666
      Location:317393
      PB1; PB1 domain
      TIGR00990
      Location:51147
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      sd00006
      Location:5179
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:545578
      TPR_11; TPR repeat
      pfam02259
      Location:535625
      FAT; FAT domain