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    Y71A12B.12 Protein zer-1 homolog;Protein zyg-11 homolog B [ Caenorhabditis elegans ]

    Gene ID: 173263, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Y71A12B.12
    Official Full Name
    Protein zer-1 homolog;Protein zyg-11 homolog B
    Primary source
    WormBase:WBGene00013509
    Locus tag
    CELE_Y71A12B.12
    See related
    AllianceGenome:WB:WBGene00013509
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be part of Cul2-RING ubiquitin ligase complex. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See Y71A12B.12 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    9
    Sequence:
    Chromosome: I; NC_003279.8 (14004428..14008484)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Glutaredoxin domain-containing protein Neighboring gene INSulin related

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Protein zer-1 homolog;Protein zyg-11 homolog B
    NP_001040709.1
    • Confirmed by transcript evidence
    NP_001379272.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      14004428..14008484
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001392970.1 → NP_001379272.1  Protein zer-1 homolog [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EC58
      Conserved Domains (1) summary
      cd21340
      Location:175 → 284
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    2. NM_001047244.3 → NP_001040709.1  Protein zyg-11 homolog B [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040709.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D0FY32
    Nucleotide Protein
    Heading Accession and Version

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