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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_031867.1 RefSeqGene
- Range
-
5001..80882
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_394
mRNA and Protein(s)
-
NM_020433.5 → NP_065166.2 junctophilin-2 isoform 1
See identical proteins and their annotated locations for NP_065166.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL034419, AL035447, AW014086, BC029957, BC043206
- Consensus CDS
-
CCDS13325.1
- UniProtKB/Swiss-Prot
- E1P5X1, O95913, Q5JY74, Q9BR39, Q9UJN4
- Related
- ENSP00000362071.3, ENST00000372980.4
- Conserved Domains (1) summary
-
- pfam02493
Location:106 → 128
- MORN; MORN repeat
-
NM_175913.4 → NP_787109.2 junctophilin-2 isoform 2
See identical proteins and their annotated locations for NP_787109.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate 3' terminal exon, compared to variant 1, resulting in a shorter isoform (2), compared to isoform 1.
- Source sequence(s)
-
AL035447, AL132999
- Consensus CDS
-
CCDS13326.1
- UniProtKB/Swiss-Prot
-
Q9BR39
- Related
- ENSP00000344590.3, ENST00000342272.3
- Conserved Domains (1) summary
-
- PLN03185
Location:4 → 127
- PLN03185; phosphatidylinositol phosphate kinase; Provisional
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000020.11 Reference GRCh38.p14 Primary Assembly
- Range
-
44106590..44187188 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006723833.5 → XP_006723896.1 junctophilin-2 isoform X1
- Conserved Domains (1) summary
-
- PLN03185
Location:4 → 133
- PLN03185; phosphatidylinositol phosphate kinase; Provisional
Alternate T2T-CHM13v2.0
Genomic
-
NC_060944.1 Alternate T2T-CHM13v2.0
- Range
-
45841151..45921818 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054323741.1 → XP_054179716.1 junctophilin-2 isoform X1