Cdca3 cell division cycle associated 3 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Cdca3provided by RGD
Official Full Name: cell division cycle associated 3provided by RGD
Primary source: RGD:1359093
See related: EnsemblRapid:ENSRNOG00000015529 AllianceGenome:RGD:1359093
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be involved in cell division and protein ubiquitination. Predicted to be located in adherens junction. Orthologous to human CDCA3 (cell division cycle associated 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Testes (RPKM 144.5), Thymus (RPKM 129.1) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 4q42

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	4	NC_086022.1 (159321203..159325072)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	4	NC_051339.1 (157634775..157638799)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	4	NC_005103.4 (157347876..157351889)

Chromosome 4 - NC_086022.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in cell division	IEA Inferred from Electronic Annotation more info
involved_in protein ubiquitination	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in adherens junction	ISO Inferred from Sequence Orthology more info
located_in cytosol	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cell division cycle-associated protein 3

Names: TOME-1; trigger of mitotic entry protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001007648.1 → NP_001007649.1 cell division cycle-associated protein 3

See identical proteins and their annotated locations for NP_001007649.1

Status: PROVISIONAL

Source sequence(s)

BC079204

UniProtKB/Swiss-Prot

Q68FW2

UniProtKB/TrEMBL

A0A8I6AGY5, A6ILL8

Conserved Domains (1) summary

PHA03301
Location:4 → 76

PHA03301; envelope glycoprotein L; Provisional