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    wht-1 ABC transporter ATP-binding protein/permease wht-1 [ Caenorhabditis elegans ]

    Gene ID: 175859, updated on 12-Jun-2024

    Summary

    Gene symbol
    wht-1
    Gene description
    ABC transporter ATP-binding protein/permease wht-1
    Locus tag
    CELE_C05D10.3
    See related
    AllianceGenome:WB:WBGene00015479
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ABC-type transporter activity and ATP binding activity. Involved in RNA interference. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in intestine. Human ortholog(s) of this gene implicated in gout; hematologic cancer (multiple); renal cell carcinoma; and toxic encephalopathy. Orthologous to human ABCG1 (ATP binding cassette subfamily G member 1); ABCG2 (ATP binding cassette subfamily G member 2 (Junior blood group)); and ABCG4 (ATP binding cassette subfamily G member 4). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See wht-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    12
    Sequence:
    Chromosome: III; NC_003281.10 (6084620..6087755, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Mitogen-activated protein kinase 15 Neighboring gene AT hook-containing protein attf-4 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATPase-coupled transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulatory ncRNA-mediated post-transcriptional gene silencing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    ABC transporter ATP-binding protein/permease wht-1
    NP_001348731.1
    • Partially confirmed by transcript evidence
    NP_001348732.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6084620..6087755 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001361719.2NP_001348731.1  ABC transporter ATP-binding protein/permease wht-1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A2K5ATT2, A0A2K5ATU8, Q11180
      Conserved Domains (1) summary
      TIGR00955
      Location:76667
      3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
    2. NM_001361720.3NP_001348732.1  ABC transporter ATP-binding protein/permease wht-1 [Caenorhabditis elegans]

      Status: REVIEWED

      Conserved Domains (1) summary
      TIGR00955
      Location:1408
      3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein