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    R07B7.2 [ Caenorhabditis elegans ]

    Gene ID: 179654, updated on 22-Aug-2024

    Summary

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    Official Symbol
    R07B7.2
    Primary source
    WormBase:WBGene00011087
    Locus tag
    CELE_R07B7.2
    See related
    AllianceGenome:WB:WBGene00011087
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (12056562..12059753, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Aminoacyl-transfer RNA synthetases class-II family profile domain-containing protein Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene Chloride channel protein Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline. Walhout AJ, et al. Curr Biol, 2002 Nov 19. PMID 12445390
    2. A combined binary interaction and phenotypic map of C. elegans cell polarity proteins. Koorman T, et al. Nat Cell Biol, 2016 Mar. PMID 26780296, Free PMC Article
    3. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
    4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    PUM-HD domain-containing protein
    NP_001256397.1
    • Confirmed by transcript evidence
    NP_001256398.1
    • Confirmed by transcript evidence
    NP_001360521.1
    • Confirmed by transcript evidence
    NP_001360522.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12056562..12059753 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373126.3 → NP_001360522.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A486WYB4

    2. NM_001269469.3 → NP_001256398.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256398.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EF98

    3. NM_001373127.2 → NP_001360521.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A486WXC9

    4. NM_001269468.3 → NP_001256397.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256397.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EBX2
    Nucleotide Protein
    Heading Accession and Version

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