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    F17A9.4 NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178999, updated on 2-Nov-2024

    Summary

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    Official Symbol
    F17A9.4
    Official Full Name
    NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00017536
    Locus tag
    CELE_F17A9.4
    See related
    AllianceGenome:WB:WBGene00017536
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable FMN binding activity and oxidoreductase activity. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See F17A9.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (6108964..6110629, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DNA-directed DNA polymerase Neighboring gene ncRNA Neighboring gene BZIP domain-containing protein Neighboring gene CWF19-like protein 1 homolog Neighboring gene NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables FMN binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein
    NP_504578.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      6108964..6110629 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072177.7 → NP_504578.1  NADH:flavin oxidoreductase/NADH oxidase N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504578.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16214
      Conserved Domains (1) summary
      cd04733
      Location:17 → 366
      OYE_like_2_FMN; Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as ...
    Nucleotide Protein
    Heading Accession and Version

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