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    T27A1.2 F-box associated domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188963, updated on 18-Sep-2024

    Summary

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    Official Symbol
    T27A1.2
    Official Full Name
    F-box associated domain-containing protein
    Primary source
    WormBase:WBGene00020834
    Locus tag
    CELE_T27A1.2
    See related
    AllianceGenome:WB:WBGene00020834
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See T27A1.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (530848..536875, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Amino acid transporter transmembrane domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Neurotransmitter-gated ion-channel ligand-binding domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene Molting protein mlt-10 Neighboring gene LIPaSe related;Triacylglycerol lipase Neighboring gene Sodium-and chloride-dependent glycine transporter 2 Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    F-box associated domain-containing protein
    NP_001303791.1
    • Partially confirmed by transcript evidence
    NP_493753.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      530848..536875 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061352.5 → NP_493753.2  F-box associated domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493753.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17273
      Conserved Domains (1) summary
      pfam07735
      Location:132 → 200
      FBA_2; F-box associated

    2. NM_001316862.3 → NP_001303791.1  F-box associated domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0M7RFF2
      Conserved Domains (1) summary
      pfam07735
      Location:191 → 259
      FBA_2; F-box associated

    RNA

    1. NR_133621.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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