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    W05F2.3 Transmembrane protein [ Caenorhabditis elegans ]

    Gene ID: 171908, updated on 2-Nov-2024

    Summary

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    Official Symbol
    W05F2.3
    Official Full Name
    Transmembrane protein
    Primary source
    WormBase:WBGene00021035
    Locus tag
    CELE_W05F2.3
    See related
    AllianceGenome:WB:WBGene00021035
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in germ line. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See W05F2.3 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003279.8 (3367640..3368550, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene AGC-kinase C-terminal domain-containing protein Neighboring gene pseudo Neighboring gene RRM domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein
    NP_491150.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      3367640..3368550 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058749.5 → NP_491150.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491150.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TYT8
    Nucleotide Protein
    Heading Accession and Version

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