U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    F48D6.4 28S ribosomal protein S36, mitochondrial;39S ribosomal protein L52, mitochondrial;NADH-ubiquinone oxidoreductase subunit [ Caenorhabditis elegans ]

    Gene ID: 180697, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    F48D6.4
    Official Full Name
    28S ribosomal protein S36, mitochondrial;39S ribosomal protein L52, mitochondrial;NADH-ubiquinone oxidoreductase subunit
    Primary source
    WormBase:WBGene00018602
    Locus tag
    CELE_F48D6.4
    See related
    AllianceGenome:WB:WBGene00018602
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in ribosome. [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See F48D6.4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Sequence:
    Chromosome: X; NC_003284.9 (4246554..4247212, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Helix-loop-helix protein 13 Neighboring gene Serpentine receptor class gamma

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    28S ribosomal protein S36, mitochondrial;39S ribosomal protein L52, mitochondrial;NADH-ubiquinone oxidoreductase subunit
    NP_508722.1
    • Confirmed by transcript evidence
    NP_508723.1
    • Confirmed by transcript evidence
    NP_508724.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      4246554..4247212 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076323.8 → NP_508724.1  NADH-ubiquinone oxidoreductase subunit [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508724.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZD9

    2. NM_076322.6 → NP_508723.1  39S ribosomal protein L52, mitochondrial [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508723.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZE0

    3. NM_076321.7 → NP_508722.1  28S ribosomal protein S36, mitochondrial [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508722.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20560
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools