U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    pho-1 Intestinal acid phosphatase [ Caenorhabditis elegans ]

    Gene ID: 173896, updated on 2-Nov-2024

    Summary

    Official Symbol
    pho-1
    Official Full Name
    Intestinal acid phosphatase
    Primary source
    WormBase:WBGene00004020
    Locus tag
    CELE_EGAP2.3
    See related
    AllianceGenome:WB:WBGene00004020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable phosphatase activity. Located in membrane raft. Is expressed in intestine. Used to study obesity. [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See pho-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    11
    Sequence:
    Chromosome: II; NC_003280.10 (5233156..5235846, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribosome biogenesis GTPase RsgA Neighboring gene DDE_Tnp_ISL3 domain-containing protein Neighboring gene ncRNA Neighboring gene intestinal acid PHOsphatase Neighboring gene tRNA-Ile

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables acid phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane raft HDA PubMed 
    located_in side of membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Intestinal acid phosphatase
    NP_494983.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      5233156..5235846 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062582.5NP_494983.1  Intestinal acid phosphatase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494983.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q19076
      Conserved Domains (1) summary
      pfam00328
      Location:27371
      His_Phos_2; Histidine phosphatase superfamily (branch 2)