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    srh-75 Serpentine Receptor, class H [ Caenorhabditis elegans ]

    Gene ID: 188057, updated on 2-Nov-2024

    Summary

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    Official Symbol
    srh-75
    Official Full Name
    Serpentine Receptor, class H
    Primary source
    WormBase:WBGene00005296
    Locus tag
    CELE_T04C12.2
    See related
    AllianceGenome:WB:WBGene00005296
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See srh-75 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (11055294..11057143, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Conserved plasma membrane protein Neighboring gene LITAF domain-containing protein Neighboring gene LITAF domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. Robertson HM. Genome Res, 2000 Feb. PMID 10673277
    2. Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences. Robert VJ, et al. Genes Dev, 2005 Apr 1. PMID 15774721, Free PMC Article
    3. Regulation of signaling genes by TGFbeta during entry into dauer diapause in C. elegans. Liu T, et al. BMC Dev Biol, 2004 Sep 20. PMID 15380030, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class H
    NP_001024099.2
    • Partially confirmed by transcript evidence
    NP_001024100.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      11055294..11057143 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001028928.3 → NP_001024099.2  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024099.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O02296
      Conserved Domains (1) summary
      pfam10318
      Location:25 → 328
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh

    2. NM_001028929.4 → NP_001024100.2  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024100.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JKP7
      Conserved Domains (1) summary
      pfam10318
      Location:35 → 292
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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