U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C41D11.3 Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3565087, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    C41D11.3
    Official Full Name
    Cysteine/serine-rich nuclear protein N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00016562
    Locus tag
    CELE_C41D11.3
    See related
    AllianceGenome:WB:WBGene00016562
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in amphid neurons; body wall musculature; pharyngeal muscle cell; and uterine muscle. Orthologous to several human genes including CSRNP3 (cysteine and serine rich nuclear protein 3). [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See C41D11.3 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    12
    Sequence:
    Chromosome: I; NC_003279.8 (4428457..4444348, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DH domain-containing protein Neighboring gene Guided entry of tail-anchored proteins factor 1 Neighboring gene Uncharacterized protein Neighboring gene Eukaryotic translation initiation factor 3 subunit H Neighboring gene Endonuclease G, mitochondrial Neighboring gene TM2 domain-containing protein C41D11.9

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Cysteine/serine-rich nuclear protein N-terminal domain-containing protein
    NP_001293389.1
    • Confirmed by transcript evidence
    NP_001367499.1
    • Confirmed by transcript evidence
    NP_001368494.1
    • Confirmed by transcript evidence
    NP_001370421.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      4428457..4444348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001379804.3 → NP_001367499.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3KLZ9
      Conserved Domains (1) summary
      pfam16019
      Location:174 → 363
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    2. NM_001379803.2 → NP_001368494.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BS72
      Conserved Domains (1) summary
      pfam16019
      Location:563 → 752
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    3. NM_001306460.3 → NP_001293389.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293389.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPM2
      Conserved Domains (1) summary
      pfam16019
      Location:562 → 750
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    4. NM_001382924.1 → NP_001370421.1  Cysteine/serine-rich nuclear protein N-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYQ1
      Conserved Domains (2) summary
      pfam16019
      Location:174 → 363
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus
      NF033913
      Location:48 → 147
      fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools