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    F45E12.5 60S ribosomal protein L23;Large ribosomal subunit protein uL14m [ Caenorhabditis elegans ]

    Gene ID: 185803, updated on 2-Nov-2024

    Summary

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    Official Symbol
    F45E12.5
    Official Full Name
    60S ribosomal protein L23;Large ribosomal subunit protein uL14m
    Primary source
    WormBase:WBGene00018475
    Locus tag
    CELE_F45E12.5
    See related
    AllianceGenome:WB:WBGene00018475
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of ribonucleoprotein complex. Orthologous to human C1orf53 (chromosome 1 open reading frame 53). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See F45E12.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (7308699..7310115, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Cullin-4 Neighboring gene B-related factor 1 Neighboring gene CTD nuclear envelope phosphatase 1 homolog Neighboring gene Neuropeptide-Like Protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    60S ribosomal protein L23;Large ribosomal subunit protein uL14m
    NP_495527.2
    • Confirmed by transcript evidence
    NP_495528.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      7308699..7310115 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063126.8 → NP_495527.2  Large ribosomal subunit protein uL14m [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495527.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20430
      Conserved Domains (1) summary
      pfam00238
      Location:53 → 178
      Ribosomal_L14; Ribosomal protein L14p/L23e

    2. NM_063127.5 → NP_495528.1  60S ribosomal protein L23 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495528.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ52
    Nucleotide Protein
    Heading Accession and Version

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