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    T07D4.2 UPF0046 protein T07D4.2 [ Caenorhabditis elegans ]

    Gene ID: 174416, updated on 2-Nov-2024

    Summary

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    Official Symbol
    T07D4.2
    Official Full Name
    UPF0046 protein T07D4.2
    Primary source
    WormBase:WBGene00011579
    Locus tag
    CELE_T07D4.2
    See related
    AllianceGenome:WB:WBGene00011579
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydrolase activity. Orthologous to human MPPED1 (metallophosphoesterase domain containing 1) and MPPED2 (metallophosphoesterase domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See T07D4.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    11
    Sequence:
    Chromosome: II; NC_003280.10 (8869549..8873942, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene V-SNARE coiled-coil homology domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UPF0046 protein T07D4.2
    NP_001022323.2
    • Confirmed by transcript evidence
    NP_001022324.2
    • Confirmed by transcript evidence
    NP_001076633.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8869549..8873942 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001027153.4 → NP_001022324.2  UPF0046 protein T07D4.2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022324.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0FLR0, Q22306, Q6BEU9
      Conserved Domains (3) summary
      cd07379
      Location:136 → 354
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain
      pfam00149
      Location:136 → 338
      Metallophos; Calcineurin-like phosphoesterase
      cl13995
      Location:151 → 300
      MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain

    2. NM_001083164.4 → NP_001076633.1  UPF0046 protein T07D4.2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001076633.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q22306
      Conserved Domains (3) summary
      cd07379
      Location:112 → 330
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain
      pfam00149
      Location:112 → 314
      Metallophos; Calcineurin-like phosphoesterase
      cl13995
      Location:127 → 276
      MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain

    3. NM_001027152.3 → NP_001022323.2  UPF0046 protein T07D4.2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022323.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q22306
      Conserved Domains (3) summary
      cd07379
      Location:96 → 314
      MPP_239FB; Homo sapiens 239FB and related proteins, metallophosphatase domain
      pfam00149
      Location:96 → 298
      Metallophos; Calcineurin-like phosphoesterase
      cl13995
      Location:111 → 260
      MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q22306.3

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