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    • Showing Current items.

    Y59E9AL.36 RRM domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 13193758, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Y59E9AL.36
    Official Full Name
    RRM domain-containing protein
    Primary source
    WormBase:WBGene00195093
    Locus tag
    CELE_Y59E9AL.36
    See related
    AllianceGenome:WB:WBGene00195093
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA binding activity. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Y59E9AL.36 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    7
    Sequence:
    Chromosome: IV; NC_003282.8 (5207109..5209481, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Troponin I 4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene t-SNARE coiled-coil homology domain-containing protein Neighboring gene Solute carrier family 23 member 2 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RRM domain-containing protein
    NP_001255269.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      5207109..5209481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268340.3 → NP_001255269.1  RRM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255269.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D6RYE4
      Conserved Domains (1) summary
      smart00360
      Location:179 → 274
      RRM; RNA recognition motif
    Nucleotide Protein
    Heading Accession and Version

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