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    sra-17 Serpentine receptor class alpha-17 [ Caenorhabditis elegans ]

    Gene ID: 185053, updated on 2-Nov-2024

    Summary

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    Official Symbol
    sra-17
    Official Full Name
    Serpentine receptor class alpha-17
    Primary source
    WormBase:WBGene00005043
    Locus tag
    CELE_F28C12.1
    See related
    AllianceGenome:WB:WBGene00005043
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and sensory perception of chemical stimulus. Predicted to be located in membrane. Is expressed in nervous system. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See sra-17 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (12688727..12690572)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Serpentine receptor class alpha-25 Neighboring gene pseudo Neighboring gene Serpentine receptor class alpha-18

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential chromatin marking of introns and expressed exons by H3K36me3. Kolasinska-Zwierz P, et al. Nat Genet, 2009 Mar. PMID 19182803, Free PMC Article
    2. C. elegans-based chemosensation strategy for the early detection of cancer metabolites in urine samples. Lanza E, et al. Sci Rep, 2021 Aug 24. PMID 34429473, Free PMC Article
    3. Identification of a nematode chemosensory gene family. Chen N, et al. Proc Natl Acad Sci U S A, 2005 Jan 4. PMID 15618405, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine receptor class alpha-17
    NP_493212.2
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      12688727..12690572
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060811.2 → NP_493212.2  Serpentine receptor class alpha-17 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493212.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O17842
      Conserved Domains (1) summary
      pfam02117
      Location:7 → 336
      7TM_GPCR_Sra; Serpentine type 7TM GPCR chemoreceptor Sra
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O17842.2

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