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    ZK1320.7 G patch domain and ankyrin repeat-containing protein 1 homolog [ Caenorhabditis elegans ]

    Gene ID: 259457, updated on 2-Nov-2024

    Summary

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    Official Symbol
    ZK1320.7
    Official Full Name
    G patch domain and ankyrin repeat-containing protein 1 homolog
    Primary source
    WormBase:WBGene00014256
    Locus tag
    CELE_ZK1320.7
    See related
    AllianceGenome:WB:WBGene00014256
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable nucleic acid binding activity. Orthologous to human GPANK1 (G-patch domain and ankyrin repeats 1). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See ZK1320.7 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (9671608..9673263)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene Transcription initiation factor TFIID subunit 8 Neighboring gene E3 ubiquitin-protein ligase arc-1 Neighboring gene Purkinje cell protein 4-like protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Caenorhabditis elegans in the study of SMN-interacting proteins: a role for SMI-1, an orthologue of human Gemin2 and the identification of novel components of the SMN complex. Burt EC, et al. Invert Neurosci, 2006 Dec. PMID 16964508
    2. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    G patch domain and ankyrin repeat-containing protein 1 homolog
    NP_496087.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      9671608..9673263
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063686.3 → NP_496087.2  G patch domain and ankyrin repeat-containing protein 1 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496087.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09655
      Conserved Domains (4) summary
      cd00204
      Location:109 → 200
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam01585
      Location:263 → 307
      G-patch; G-patch domain
      pfam12796
      Location:119 → 206
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:117 → 145
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09655.3

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