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    Y32F6A.5 Retinoid-inducible serine carboxypeptidase [ Caenorhabditis elegans ]

    Gene ID: 179459, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Y32F6A.5
    Official Full Name
    Retinoid-inducible serine carboxypeptidase
    Primary source
    WormBase:WBGene00012530
    Locus tag
    CELE_Y32F6A.5
    See related
    AllianceGenome:WB:WBGene00012530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable serine-type carboxypeptidase activity. Predicted to be involved in proteolysis. Orthologous to human SCPEP1 (serine carboxypeptidase 1). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Y32F6A.5 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (10446534..10453605, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene SET domain-containing protein Neighboring gene Transporter Neighboring gene Poly(A) polymerase Neighboring gene pseudo Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables serine-type carboxypeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Retinoid-inducible serine carboxypeptidase
    NP_001256221.1
    • Partially confirmed by transcript evidence
    NP_001367028.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      10446534..10453605 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269292.1 → NP_001256221.1  Retinoid-inducible serine carboxypeptidase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256221.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EDP0
      Conserved Domains (1) summary
      cl08270
      Location:34 → 442
      Peptidase_S10; Serine carboxypeptidase

    2. NM_001380746.2 → NP_001367028.1  Retinoid-inducible serine carboxypeptidase [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EDP0
      Conserved Domains (1) summary
      cl08270
      Location:34 → 442
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version

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