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    nhr-112 Nuclear receptor domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 180115, updated on 18-Sep-2024

    Summary

    Official Symbol
    nhr-112
    Official Full Name
    Nuclear receptor domain-containing protein
    Primary source
    WormBase:WBGene00003702
    Locus tag
    CELE_Y70C5C.6
    See related
    AllianceGenome:WB:WBGene00003702
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Involved in defense response to Gram-negative bacterium and innate immune response. Predicted to be located in nucleus. Is expressed in several structures, including head; hypodermis; pharynx; reproductive system; and tail. Human ortholog(s) of this gene implicated in Alzheimer's disease; coronary artery disease (multiple); hepatocellular carcinoma; lipid metabolism disorder; and type 2 diabetes mellitus. Orthologous to human PPARA (peroxisome proliferator activated receptor alpha) and PPARD (peroxisome proliferator activated receptor delta). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See nhr-112 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (16722061..16723844, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class H Neighboring gene pseudo Neighboring gene Peptidase_M75 domain-containing protein Neighboring gene ncRNA Neighboring gene F-box domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Nuclear receptor domain-containing protein
    NP_001024286.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      16722061..16723844 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001029115.6NP_001024286.1  Nuclear receptor domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024286.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62496
      Conserved Domains (2) summary
      smart00399
      Location:267
      ZnF_C4; c4 zinc finger in nuclear hormone receptors
      smart00430
      Location:138310
      HOLI; Ligand binding domain of hormone receptors