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    C18E9.2 Translocation protein SEC62 [ Caenorhabditis elegans ]

    Gene ID: 174429, updated on 2-Nov-2024

    Summary

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    Official Symbol
    C18E9.2
    Official Full Name
    Translocation protein SEC62
    Primary source
    WormBase:WBGene00007683
    Locus tag
    CELE_C18E9.2
    See related
    AllianceGenome:WB:WBGene00007683
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in post-translational protein targeting to membrane, translocation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum and membrane. Orthologous to human SEC62 (SEC62 homolog, preprotein translocation factor). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See C18E9.2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    8
    Sequence:
    Chromosome: II; NC_003280.10 (8965006..8966919)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Vesicle transport protein Neighboring gene EF-hand domain-containing protein Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 Neighboring gene SUZ domain-containing protein;Suppressor of zyg-1 protein 20 Neighboring gene uncharacterized protein Neighboring gene Mitochondrial import receptor subunit TOM40 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in post-translational protein targeting to membrane, translocation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Translocation protein SEC62
    NP_495908.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8965006..8966919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063507.6 → NP_495908.2  Translocation protein SEC62 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495908.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18093
      Conserved Domains (1) summary
      pfam03839
      Location:46 → 280
      Sec62; Translocation protein Sec62

    RNA

    1. NR_023948.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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