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    C52A11.3 PDZ domain-containing protein C52A11.3 [ Caenorhabditis elegans ]

    Gene ID: 183712, updated on 18-Sep-2024

    Summary

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    Official Symbol
    C52A11.3
    Official Full Name
    PDZ domain-containing protein C52A11.3
    Primary source
    WormBase:WBGene00008257
    Locus tag
    CELE_C52A11.3
    See related
    AllianceGenome:WB:WBGene00008257
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See C52A11.3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (10737359..10738628)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Protein fantom Neighboring gene C2H2-type domain-containing protein Neighboring gene GLOBIN domain-containing protein Neighboring gene PDZ domain-containing protein Neighboring gene ncRNA Neighboring gene Protein ECT2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    PDZ domain-containing protein C52A11.3
    NP_496315.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10737359..10738628
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063914.4 → NP_496315.2  PDZ domain-containing protein C52A11.3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496315.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09284
      Conserved Domains (1) summary
      cd00992
      Location:51 → 124
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09284.2

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