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    MAGI2-AS2 MAGI2 antisense RNA 2 [ Homo sapiens (human) ]

    Gene ID: 100874021, updated on 17-Sep-2024

    Summary

    Official Symbol
    MAGI2-AS2provided by HGNC
    Official Full Name
    MAGI2 antisense RNA 2provided by HGNC
    Primary source
    HGNC:HGNC:40861
    See related
    Ensembl:ENSG00000226978 AllianceGenome:HGNC:40861
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See MAGI2-AS2 in Genome Data Viewer
    Location:
    7q21.11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (79008988..79012277)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (80260905..80264210)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (78638304..78641593)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 2 Neighboring gene uncharacterized LOC124901683 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78094936-78095436 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78095437-78095937 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78127410-78127910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:78127911-78128411 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:78152989-78153548 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:78192436-78193031 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:78206961-78207460 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:78207790-78208526 Neighboring gene UFC1 pseudogene 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:78416757-78417956 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:78598351-78598852 Neighboring gene RNA, U6 small nuclear 337, pseudogene Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Other Names

    • MAGI2 antisense RNA 2 (non-protein coding)

    Clone Names

    • AC006324.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_046689.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC006324
      Related
      ENST00000411616.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      79008988..79012277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      80260905..80264210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)