NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_017092.1 RefSeqGene
- Range
-
5001..399215
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_411
mRNA and Protein(s)
-
NM_001173484.2 → NP_001166955.1 nebulette isoform 3
See identical proteins and their annotated locations for NP_001166955.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' and 3' UTR and has multiple coding region differences, compared to variant 1. These differences cause translation initiation at an alternate start codon and result in a frameshift. The encoded isoform (3) is shorter and has distinct N- and C-termini, compared to isoform 1.
- Source sequence(s)
-
AB209311, BC144201, BM973051, DT220372
- UniProtKB/Swiss-Prot
-
O76041
- UniProtKB/TrEMBL
-
Q59FZ8
- Conserved Domains (2) summary
-
- smart00227
Location:98 → 128
- NEBU; The Nebulin repeat is present also in Las1
- cd09447
Location:5 → 57
- LIM_LASP; The LIM domain of LIM and SH3 Protein (LASP)
-
NM_001377322.1 → NP_001364251.1 nebulette isoform 4
Status: REVIEWED
- Source sequence(s)
-
AL157398, AL359175, AL731547
- Conserved Domains (4) summary
-
- smart00227
Location:98 → 128
- NEBU; The Nebulin repeat is present also in Las1
- cd09447
Location:5 → 57
- LIM_LASP; The LIM domain of LIM and SH3 Protein (LASP)
- cd11935
Location:244 → 301
- SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
- pfam00880
Location:67 → 94
- Nebulin; Nebulin repeat
-
NM_001377323.1 → NP_001364252.1 nebulette isoform 5
Status: REVIEWED
- Source sequence(s)
-
AL157398, AL359175, AL731547
- UniProtKB/TrEMBL
-
Q8N8M3
- Conserved Domains (4) summary
-
- smart00227
Location:82 → 112
- NEBU; The Nebulin repeat is present also in Las1
- cd11935
Location:197 → 254
- SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
- pfam00880
Location:51 → 78
- Nebulin; Nebulin repeat
- cl02475
Location:8 → 41
- LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
-
NM_001377324.1 → NP_001364253.1 nebulette isoform 6
Status: REVIEWED
- Source sequence(s)
-
AL157398, AL359175, AL731547
- UniProtKB/TrEMBL
-
Q8N8M3
- Conserved Domains (3) summary
-
- smart00227
Location:79 → 109
- NEBU; The Nebulin repeat is present also in Las1
- cd11935
Location:194 → 251
- SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
- cl02475
Location:5 → 38
- LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
-
NM_001377325.1 → NP_001364254.1 nebulette isoform 7
Status: REVIEWED
- Source sequence(s)
-
AL157398, AL359175, AL731547
- UniProtKB/TrEMBL
-
Q8N8M3
- Conserved Domains (4) summary
-
- smart00227
Location:76 → 106
- NEBU; The Nebulin repeat is present also in Las1
- cd11935
Location:191 → 248
- SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
- pfam00880
Location:45 → 72
- Nebulin; Nebulin repeat
- cl02475
Location:2 → 35
- LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
-
NM_001377326.1 → NP_001364255.1 nebulette isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), as well as variants 9 and 10, encodes isoform 8.
- Source sequence(s)
-
AL157398, AL359175, AL731547
- UniProtKB/TrEMBL
-
Q8N8M3
- Conserved Domains (4) summary
-
- smart00227
Location:62 → 92
- NEBU; The Nebulin repeat is present also in Las1
- cl02475
Location:1 → 21
- LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
- pfam00880
Location:31 → 58
- Nebulin; Nebulin repeat
- cl17036
Location:177 → 234
- SH3; Src Homology 3 domain superfamily
-
NM_001377327.1 → NP_001364256.1 nebulette isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (9), as well as variants 8 and 10, encodes isoform 8.
- Source sequence(s)
-
AL157398, AL359175, AL731547
- UniProtKB/TrEMBL
-
Q8N8M3
- Related
-
ENST00000675702.1
- Conserved Domains (4) summary
-
- smart00227
Location:62 → 92
- NEBU; The Nebulin repeat is present also in Las1
- cl02475
Location:1 → 21
- LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
- pfam00880
Location:31 → 58
- Nebulin; Nebulin repeat
- cl17036
Location:177 → 234
- SH3; Src Homology 3 domain superfamily
-
NM_001377328.1 → NP_001364257.1 nebulette isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (10), as well as variants 8 and 9, encodes isoform 8.
- Source sequence(s)
-
AL157398, AL359175, AL731547
- UniProtKB/TrEMBL
-
Q8N8M3
- Related
-
ENST00000675700.1
- Conserved Domains (4) summary
-
- smart00227
Location:62 → 92
- NEBU; The Nebulin repeat is present also in Las1
- cl02475
Location:1 → 21
- LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
- pfam00880
Location:31 → 58
- Nebulin; Nebulin repeat
- cl17036
Location:177 → 234
- SH3; Src Homology 3 domain superfamily
-
NM_006393.3 → NP_006384.1 nebulette isoform 1
See identical proteins and their annotated locations for NP_006384.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). This isoform (1) is also known as the sarcomeric isoform.
- Source sequence(s)
-
AL157398
- Consensus CDS
-
CCDS7134.1
- UniProtKB/Swiss-Prot
- B0YJ45, B9EIM9, E9PRX7, O76041, Q2TBD0, Q5VZT2, Q70I54, Q9UIC4
- UniProtKB/TrEMBL
-
B0YJ47
- Related
- ENSP00000366326.4, ENST00000377122.9
- Conserved Domains (3) summary
-
- smart00227
Location:762 → 791
- NEBU; The Nebulin repeat is present also in Las1
- cd11935
Location:957 → 1014
- SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
- cl26511
Location:294 → 712
- Neuromodulin_N; Gap junction protein N-terminal region
-
NM_213569.2 → NP_998734.1 nebulette isoform 2
See identical proteins and their annotated locations for NP_998734.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at an alternate start codon, compared to variant 1. The encoded isoform (2) is shorter and has a distinct N-terminus compared to isoform 1. This isoform is referred to as LIM-nebulette or the non-muscle isoform.
- Source sequence(s)
-
AB209311, AJ580772, BI522541, BM973051, CR744526
- Consensus CDS
-
CCDS7133.1
- UniProtKB/TrEMBL
-
Q8N8M3
- Related
- ENSP00000393896.2, ENST00000417816.2
- Conserved Domains (4) summary
-
- smart00227
Location:98 → 128
- NEBU; The Nebulin repeat is present also in Las1
- cd09447
Location:5 → 57
- LIM_LASP; The LIM domain of LIM and SH3 Protein (LASP)
- cd11935
Location:213 → 270
- SH3_Nebulette_C; C-terminal Src Homology 3 domain of Nebulette and LIM-nebulette (or Lasp2)
- pfam00880
Location:67 → 94
- Nebulin; Nebulin repeat
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001010896.2: Suppressed sequence
- Description
- NM_001010896.2: This RefSeq was removed because it is now thought that this gene does not encode a protein.
-
NM_001177483.1: Suppressed sequence
- Description
- NM_001177483.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
-
NM_016365.1: Suppressed sequence
- Description
- NM_016365.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.