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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008028.1 RefSeqGene
- Range
-
4949..15453
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_000751.3 → NP_000742.1 acetylcholine receptor subunit delta isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC092165, AK300109, X55019
- Consensus CDS
-
CCDS2494.1
- UniProtKB/Swiss-Prot
- A8K661, B4DT92, Q07001, Q52LH4
- Related
- ENSP00000258385.3, ENST00000258385.8
- Conserved Domains (2) summary
-
- pfam02931
Location:25 → 246
- Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
- pfam02932
Location:253 → 489
- Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
-
NM_001256657.2 → NP_001243586.1 acetylcholine receptor subunit delta isoform 2 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC092165, AK300109, X55019
- Consensus CDS
-
CCDS58754.1
- UniProtKB/Swiss-Prot
-
Q07001
- Related
- ENSP00000438380.1, ENST00000543200.5
- Conserved Domains (3) summary
-
- TIGR00860
Location:23 → 461
- LIC; Cation transporter family protein
- pfam02931
Location:25 → 231
- Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
- pfam02932
Location:238 → 474
- Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
-
NM_001311195.2 → NP_001298124.1 acetylcholine receptor subunit delta isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks two alternate internal exons compared to variant 1. These differences cause translation initiation at a downstream start codon and result in an isoform (3) with a shorter and distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AC092165, AK300109, AK304890
- UniProtKB/TrEMBL
-
B4E3W4
- Conserved Domains (1) summary
-
- pfam02932
Location:76 → 295
- Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
-
NM_001311196.2 → NP_001298125.1 acetylcholine receptor subunit delta isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate internal splice junction compared to variant 1. This difference causes translation initiation at a downstream start codon and results in an isoform (4) with a shorter and distinct N-terminus compared to isoform 1.
- Source sequence(s)
-
AC092165, AK300109, CD013895
- UniProtKB/Swiss-Prot
-
Q07001
- Conserved Domains (2) summary
-
- pfam02931
Location:19 → 145
- Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
- pfam02932
Location:152 → 388
- Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
232526160..232536664
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
233012979..233023446
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054340333.1 → XP_054196308.1 acetylcholine receptor subunit delta isoform X1