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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011581.2 RefSeqGene
- Range
-
44418..174628
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_000547.6 → NP_000538.3 thyroid peroxidase isoform a precursor
See identical proteins and their annotated locations for NP_000538.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a, also known as TPO1).
- Source sequence(s)
-
AC141930, AW874082, BC063107, BC095448, J02969
- Consensus CDS
-
CCDS1643.1
- UniProtKB/Swiss-Prot
- P07202, P09934, P09935, Q8IUL0, Q8NF94, Q8NF95, Q8NF96, Q8NF97, Q8TCI9
- UniProtKB/TrEMBL
-
Q502Y3
- Related
- ENSP00000318820.7, ENST00000345913.8
- Conserved Domains (3) summary
-
- cd00033
Location:742 → 795
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- cd09825
Location:167 → 734
- thyroid_peroxidase; Thyroid peroxidase (TPO)
- pfam07645
Location:796 → 838
- EGF_CA; Calcium-binding EGF domain
-
NM_001206744.2 → NP_001193673.1 thyroid peroxidase isoform a precursor
See identical proteins and their annotated locations for NP_001193673.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks a segment in the 5' UTR and encodes the same isoform (a, also known as TPO1), compared to variant 1.
- Source sequence(s)
-
AC141930, BC095448, Y00406
- Consensus CDS
-
CCDS1643.1
- UniProtKB/Swiss-Prot
- P07202, P09934, P09935, Q8IUL0, Q8NF94, Q8NF95, Q8NF96, Q8NF97, Q8TCI9
- UniProtKB/TrEMBL
-
Q502Y3
- Related
- ENSP00000329869.4, ENST00000329066.9
- Conserved Domains (3) summary
-
- cd00033
Location:742 → 795
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- cd09825
Location:167 → 734
- thyroid_peroxidase; Thyroid peroxidase (TPO)
- pfam07645
Location:796 → 838
- EGF_CA; Calcium-binding EGF domain
-
NM_001206745.2 → NP_001193674.1 thyroid peroxidase isoform b precursor
See identical proteins and their annotated locations for NP_001193674.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks a segment in the 5' UTR and an in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (b, also known as TPO2) that is shorter than isoform a.
- Source sequence(s)
-
AC141930, BC063107, BE046044, J02969, X17358
- Consensus CDS
-
CCDS1644.1
- UniProtKB/TrEMBL
-
Q502Y3
- Conserved Domains (4) summary
-
- cd00033
Location:685 → 738
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- cd09825
Location:167 → 677
- thyroid_peroxidase; Thyroid peroxidase (TPO)
- pfam03098
Location:151 → 642
- An_peroxidase; Animal haem peroxidase
- pfam07645
Location:739 → 781
- EGF_CA; Calcium-binding EGF domain
-
NM_175719.4 → NP_783650.1 thyroid peroxidase isoform b precursor
See identical proteins and their annotated locations for NP_783650.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an an alternate in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (b, also known as TPO2) that is shorter than isoform a.
- Source sequence(s)
-
AC141930, AW874082, BC063107, BC095448, J02970
- Consensus CDS
-
CCDS1644.1
- UniProtKB/TrEMBL
-
Q502Y3
- Related
- ENSP00000371636.3, ENST00000382201.7
- Conserved Domains (4) summary
-
- cd00033
Location:685 → 738
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- cd09825
Location:167 → 677
- thyroid_peroxidase; Thyroid peroxidase (TPO)
- pfam03098
Location:151 → 642
- An_peroxidase; Animal haem peroxidase
- pfam07645
Location:739 → 781
- EGF_CA; Calcium-binding EGF domain
-
NM_175721.3 → NP_783652.1 thyroid peroxidase isoform d precursor
See identical proteins and their annotated locations for NP_783652.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an in-frame segment of the coding region, compared to variant 1. It encodes a shorter isoform (d, also known as TPO4) compared to isoform a. This variant lacks the 5'-most non-coding exon because of alternate splicing, the extension at the 5' end is uncertain.
- Source sequence(s)
-
AW874082, AY136822, CB986756, DA958481, M55702, X17358, Y00406
- UniProtKB/TrEMBL
-
Q502Y3
- Related
- ENSP00000263886.6, ENST00000346956.7
- Conserved Domains (3) summary
-
- cd00033
Location:742 → 795
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- cd09825
Location:167 → 734
- thyroid_peroxidase; Thyroid peroxidase (TPO)
- pfam03098
Location:151 → 699
- An_peroxidase; Animal haem peroxidase
-
NM_175722.3 → NP_783653.1 thyroid peroxidase isoform e precursor
See identical proteins and their annotated locations for NP_783653.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an alternate in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (e, also known as TPO5) that is shorter than isoform a. This variant lacks the 5'-most non-coding exon because of alternate splicing, the extension at the 5' end is uncertain.
- Source sequence(s)
-
AF439430, AF533528, AW874082, BC095448, CD608890, DA958481
- Consensus CDS
-
CCDS1646.1
- UniProtKB/TrEMBL
-
Q502Y3
- Related
- ENSP00000371633.1, ENST00000382198.5
- Conserved Domains (4) summary
-
- cd00033
Location:569 → 622
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- cl14561
Location:1 → 561
- An_peroxidase_like; Animal heme peroxidases and related proteins
- pfam03098
Location:151 → 526
- An_peroxidase; Animal haem peroxidase
- pfam07645
Location:623 → 665
- EGF_CA; Calcium-binding EGF domain
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_175720.1: Suppressed sequence
- Description
- NM_175720.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.